Insilico interaction analysis of herbal bioactive molecules with Penicillin binding protein in staphylococcus aureus

Authors

  • Florida Tilton Biozone research Technologies Pvt. Ltd.
  • RANJITH KUMAR M Asan Memorial College of Arts & Science, Chennai
  • JEYANTHI V Asan Memorial College of Arts & Science, Chennai
  • LAKSHMI PRIYA K Biozone research Technologies Pvt. Ltd.

Abstract

Staphylococcus aureus is an opportunistic bacterial pathogen associated with asymptomatic colonization of the skin and mucosal surfaces of normal humans. Staphylococcus aureus isolates are often multidrug resistant. Antibiotics resistant Staphylococcus aureus is an emerging concern in the medical field. Due to their increasing resistance to numerous antibiotics, screening for alternate compound is required. Penicillin binding protein (PBP) was considered as an essential drug target for inhibiting bacterial growth. Molecular docking studies were performed to identify the lead molecule against Penicillin binding protein. Interaction of PBP with the plant derived compounds indicates the effective interaction of rosmarinic acid with highest fitness score and maximum number of hydrogen bonds (h-bonds). The study concludes that rosmarinic acid may be effective as an inhibitor for PBP and hence, can be regarded as a potential drug candidate for treating β-lactam resistant Staphylococcus aureus

Downloads

Download data is not yet available.

Author Biographies

Florida Tilton, Biozone research Technologies Pvt. Ltd.

Managing Director

Biozone research Technologies Pvt. Ltd.

RANJITH KUMAR M, Asan Memorial College of Arts & Science, Chennai

Department of Microbiology

 

JEYANTHI V, Asan Memorial College of Arts & Science, Chennai

Department of Microbiology

LAKSHMI PRIYA K, Biozone research Technologies Pvt. Ltd.

Bioinformatics

Head Scientific operations

References

A.A. Akindele, I.K. Adewuyi, O.A. Adefioye, S.A. Adedokun and A.O. Olaolu. Antibiogram and Beta-Lactamase Production of Staphylococcus aureus Isolates from Different Human Clinical Specimens in a Tertiary Health Institution in Ile-ife, Nigeria; American-Eurasian Journal of Scientific Research 5 (4): 2010, 230-233.

Ellie. J. C. G., Diani. M. C and Catherine. A. N. Bacteriology and activity of 10 oral antimicrobial agents against bacteria isolated from consecutive cases. Diabetic care, 1996, volume 19, number 6.

Girija CR, Prasantha K, Chtan SP, Noor SB, Akheel AS. Molecular docking studies of curcumin derivatives with multiple protein targets for procarcinogen activating enzyme inhibition. J. Proteomics Bioinforma. 2010, 3(6): 200-203.

Haas, D. W., and M. P. MacAndrew. Bacterial osteomyelitis in adults:evolving considerations in diagnosis and treatment. Am. J. Med. 1996, 101:550–560.

Hariprasath, B, molecular docking studies of plant derived compounds; Asian J Pharm Clin Res, Vol 5, Suppl 1, 2012, 87-88

Harris AD, Samore MH, Lipsitch M, Kaye KS, Perencevich E and Carmeli Y. Control-group selection importance in studies of antimicrobial resistance: examples applied to Pseudomonas aeruginosa, enterococci, and Escherichia coli. Clin. Infect. Dis. 2002, 34:1558–1563.

Hasnahana Chetia, Dhirendra Kumar Sharma, Rituparna Sarma, Ankit Verma, An in silico approach to discover potential inhibitors against multi_drug resistant bacteria producing new-delhi metallo-β-lactamase 1 (ndm-1)enzyme; Int J Pharm Pharm Sci, 2014, Vol 6, Issue 4, 299-303

Jones G, Willett P, Glen RC, Leach AR, Taylor R, Development and validation of a genetic algorithm for flexible docking. J Mol Biol1997, 267: 727-748.

K. M. Kumar, P. Anitha, V. Sivasakthi, Susmita Bag, P. Lavanya, Anand Anbarasu, Sudha Ramaiah , In silico study on Penicillin derivatives and Cephalosporins for upper respiratory tract bacterial pathogens; 2014, 3 Biotech 4:241–251, DOI 10.1007/s13205-013-0147-z

Laskowski,R.A., MasArthur,M.W., Moss,D.S. and Thornton,J.M. PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 1993, 26, 283–291

Lévesque, C.; Piché, L.; Larose, C.; Roy, P.H, PCR mapping of integrons reveals several novel combinations of resistance genes. Antimicrobial Agents Chemother. 1995, 39(1): 185-191.

Nissink JW, Murray C, Hartshorn M, Verdonk ML, Cole JC. A new test set for validating predictions of protein-ligand interaction. Proteins 4: 2002, 457-471.

Rashmi Rekha Gogoi, Dhrubajyoti Gogoi & Rajib Lochan Bezbaruah , Virtual Screening of compounds from Tabernaemontana divaricata for potential anti-bacterial activity Bioinformation 10(3): 2014, 152-156

Sainsbury S, Bird L, Rao V, Shepherd SM, Stuart DI, Hunter WN, Crystal structures of Penicillin binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms. J Mol Biol. 2011, Jan 7; 405 (1):173–184. Cited in PubMed; PMID: 20974151.

Sauvage E, Kerff F, Terrak M, Ayala JA, Charlier P, The Penicillin-binding proteins: structure and role in peptidoglycan biosynthesis. FEMS Microbiol Rev, 2008, 32:234–258

Selvaraj M, Malik BK. Modeling of human CCR5 as target for HIV-I and virtual screening with therapeutic compounds. Bioinformation, 3(2): 2008, 89-94.

Shyh-Ming Tsao, Cheng-Chin Hsu and Mei-Chin Yin. Meticillin-resistant Staphylococcus aureus infection in diabetic mice enhanced inflammation and coagulation; J Med Microbiol, 2005, vol. 55 no. 4 379-385.

Turk S, Verlaine O, Gerards T, Zivec M, Humljan J, Sosic I,. New noncovalent Inhibitors of Penicillin-Binding Proteins from Penicillin-Resistant Bacteria. Plos one. May 9; 6 (5): e19418. Cited in PubMed; PMID: 21573060.

Verma S, Joshi S, Chitnis V, Hemwani N, Chitnis D. Growing problem of methicillin resistant staphylococci – Indian scenario. Indian J Med Sci; 2000, 54:535–40.

Yoshida H, Kawai F, Obayashi E, Akashi S, Roper DI, Tame JR,. Crystal structures of penicillin-binding protein 3 (PBP3) from methicillin-resistant Staphylococcus aureus in the apo and cefotaxime bound forms. J Mol Biol. 2012, Oct 26; 423 (3): 351–364. Cited in PubMed; PMID: 22846910

Published

01-03-2016

How to Cite

Tilton, F., R. K. . M, J. . V, and L. P. . K. “Insilico Interaction Analysis of Herbal Bioactive Molecules With Penicillin Binding Protein in Staphylococcus Aureus”. Asian Journal of Pharmaceutical and Clinical Research, vol. 9, no. 2, Mar. 2016, pp. 44-47, https://journals.innovareacademics.in/index.php/ajpcr/article/view/3165.

Issue

Section

Original Article(s)