PREDICTION OF LOG P AND SPECTRUM OF QUERCETINE, GLUCOSAMINE, AND ANDROGRAPHOLIDE AND ITS CORRELATION WITH LABORATORY ANALYSIS
DOI:
https://doi.org/10.22159/ijpps.2016v8i11.9101Keywords:
Ab initio, Lipophilicity, Molecular mechanics, Semiempirical, Ultraviolet-visible, 1H-NMR, 13C-NMRAbstract
Objective: This study was aimed to confirm the result of computational prediction of log P and spectrum (ultraviolet-visible, 1H-NMR, 13C-NMR) of quercetin, glucosamine and andrographolide with laboratory analysis.
Methods: Quercetine, glucosamine and andrographolide, were downloaded from ChemSpider and were geometry optimised. Log P and spectrum were calculated and predicted and the data obtained were compared with laboratory results. The correlation was calculated by employing mean absolute deviation (MAD), mean square error (MSE), mean forecast error (MFE), and mean absolute percentage error (MAPE) parameters.
Results: The smallest energy value of geometry optimisation was provided by ab initio method. Log P prediction showed good accuracy, with r-value 0.995 and p-value 0.05 respectively. The error parameters were: MAD 0.19; MSE 0.06; MFE 0.16, and MAPE 8.62%, respectively. Prediction of λ maximum by ab initio, semiempirical, and molecular mechanics were respectively: MAD 2.67, 6.67, and 28.67; MSE 8.67, 45.33, and 830; MFE 2.67, 6.67, and 28.67; and MAPE 1.10%, 2.79%, and 11.99%; r-value 0.997, 0.997, and 0.979; and p-value 0.044, 0.043, and 0.129. 1H-NMR and 13C-NMR spectra prediction were: MAD 0.73 and 1.58; MSE 1.15 and 7.41; MFE 0.27 and 0.69; MAPE 18.35% and 2.68%; r-value 0.942 and 0.986; and p-value 0.001 and 0.001.
Conclusion: There is a positive correlation between computational ab initio calculation method with experimental results in predicting log P and spectrum of quercetine, glucosamine, and andrographolide.
Downloads
References
Zeilinski TJ, Swift ML. What every chemist should know about computers II. Chem Educ 1997;2:258-62.
Young DC. Computational chemistry: a practical guide for applying the technique to real-world problems. New York: John Wiley and Sons Inc; 2001.
Morikawa K, Nonaka M, Narahara M, Torii I, Kawaguchi K, Yoshikawa T, et al. Inhibitory effect of quercetin on carrageenan-induced inflammation in rats. Life Sci 2003;74:709-21.
Shen YC, Chen CF, Chiou WF. Andrographolide prevents oxygen radical production by human neutrophils: possible mechanism involved in its anti-inflammatory effect. Br J Pharmacol 2002;135:399-406.
Xia YF, Ye BQ, Li YD, Wang JG, He XJ, Lin X, et al. Andrographolide attenuates inflammation by inhibition of NF-kappaB activation through covalent modification of reduced cysteine62 of p50. J Immunol 2004;173:4207-17.
Wiart C. Ethnopharmacology of medicinal plants, Asia and the Pacific. Totowa (New Jersey, USA). Humana Press Inc; 2006.
Nagaoka I, Igarashi M, Hua J, Ju Y, Yomogida S, Sakamoto K. Recent aspects of the anti-inflammatory actions of glucosamine. Carbohydr Polym 2011;84:825-30.
Petersen SG, Beyer N, Hansen M, Holm L, Aagaard P, Mackey A, et al. Nonsteroidal anti-inflammatory drug or glucosamine reduced pain and improved muscle strength with resistance training in a randomised controlled trial of knee osteoarthritis patients. Arch Phys Med Rehabil 2011;92:1185-93.
Silverstein RM, Bassler GC, Morril TC. Spectrometric identification of organic compounds, New York: John Wiley and Sons Inc; 1991.
Tekko IA, Bonner MC, Williams AC. An optimised reverse-phase high performance liquid chromatographic method for evaluating percutaneous absorption of glucosamine hydrochloride. J Pharm Biomed Anal 2006;41:385-92.
Shen X, Yang M, Tomellini SA. Liquid chromatographic analysis of glucosamine in commercial dietary supplements using indirect fluorescent detection. J Chromatogr Sci 2007;45:70-5.